Vlastimil asked for examples of transitive sets. A transitive set is a set every element of which is a subset of it. (Hrbacek and Jech, Introduction to Set Theory, p. 50) There is no lack of examples. The null set vacuously satisfies the condition 'if x is an element of S, then x is a subset of S.' The set consisting of the null set — {{ }} — is also transitive: it has exactly one element, the null set, and that element is a subset of it because the null set is a subset of every set.
Now consider the set consisting of the foregoing two sets, the null set and the set consisting of the null set: {{ }, {{ }}}. This set has two elements and both are subsets of it. The null set is a subset of every set, and the set consisting of the null set is also a subset of it in virtue of the fact that the null set is an element of it.
If we identify 0 with the null set, and 1 with the set consisting of the null set, and 2 with the set consisting of the null set and the set consisting of the null set, then 3 will be the set whose elements are the elements of 0, 1, and 2 which is: {{ }, {{ }}, {{ }, {{ }}}}. This last set has three elements and each is a subset of it. One can continue like this and generate as many transitive sets as one likes. For each natural number there is a corresponding transitive set.
Now how does all this bear upon my assertion that a (mathematical) set is an entity 'over and above' its members (elements)? That sets are treated in set theory as single items 'over and above' their members can be seen from the fact that some sets have sets as members without having their members as members. The power set of {Socrates, Plato} has {Socrates} and {Plato} as members, but it does not have Socrates and Plato as members. Therefore, {Socrates} is distinct from Socrates, and {Plato} from Plato. For if these singletons were identical to their members, then the power set would have Socrates and Plato as members.
Vlastimil seems to think that the existence of transitive sets is somehow at odds with the claim that sets are distinct from their members. Or perhaps he thinks that some sets are distinct from their members and some are not. So consider {{ }, {{ }}}. This is a transitive set since every member of it is a subset of it, which is equivalent to saying that every member of a member of it is a member of it. Thus { } is a member of {{ }}, which is a member of {{ }, {{ }}}. But although every member of the set in question is a subset of it, this does not alter the fact that the set is distinct from its members.
So I'm not sure what Vlastimil is driving at.
Note that if every member of a set is a subset of it, this is not to say that every subset of it is a member of it. {{ }, {{ }}} has itself and {{{ }}} as subsets but not as elements. Only if there were a set all of whose members are subsets of it and all of whose subsets are members of it could one argue that there are sets for which the membership and subset relations collapse, and with it the distinction between a set and its members.
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